MAGATT pipeline
Marker Assisted Gene Annotation Transfert for Triticeae.
Snakemake pipeline used to transfert GFF annotation on a new assembly with a fine target mapping approach.
Documentation : https://umr-gdec.pages.mia.inra.fr/magatt/
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bin | ||
docs | ||
envs | ||
report | ||
rules | ||
.gitignore | ||
.gitlab-ci.yml | ||
CHANGELOG | ||
Dockerfile | ||
LICENSE | ||
README.md | ||
Singularity | ||
Snakefile | ||
cluster-hpc2.json | ||
cluster-sibi.json | ||
config.yaml | ||
env.yaml |
Marker Assisted Gene Annotation Transfert for Triticeae.
Snakemake pipeline used to transfert GFF annotation on a new assembly with a fine target mapping approach.
Documentation : https://umr-gdec.pages.mia.inra.fr/magatt/